Package: mutaliskRutils 0.0.0.9000
mutaliskRutils: What the Package Does (One Line, Title Case)
What the package does (one paragraph).
Authors:
mutaliskRutils_0.0.0.9000.tar.gz
mutaliskRutils_0.0.0.9000.zip(r-4.5)mutaliskRutils_0.0.0.9000.zip(r-4.4)mutaliskRutils_0.0.0.9000.zip(r-4.3)
mutaliskRutils_0.0.0.9000.tgz(r-4.4-any)mutaliskRutils_0.0.0.9000.tgz(r-4.3-any)
mutaliskRutils_0.0.0.9000.tar.gz(r-4.5-noble)mutaliskRutils_0.0.0.9000.tar.gz(r-4.4-noble)
mutaliskRutils_0.0.0.9000.tgz(r-4.4-emscripten)mutaliskRutils_0.0.0.9000.tgz(r-4.3-emscripten)
mutaliskRutils.pdf |mutaliskRutils.html✨
mutaliskRutils/json (API)
| # Install 'mutaliskRutils' in R: |
| install.packages('mutaliskRutils', repos = c('https://selkamand.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/selkamand/mutaliskrutils/issues
Last updated 10 months agofrom:c2f360c51c. Checks:OK: 3 NOTE: 4. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Sep 10 2024 |
| R-4.5-win | NOTE | Sep 10 2024 |
| R-4.5-linux | NOTE | Sep 10 2024 |
| R-4.4-win | NOTE | Sep 10 2024 |
| R-4.4-mac | NOTE | Sep 10 2024 |
| R-4.3-win | OK | Sep 10 2024 |
| R-4.3-mac | OK | Sep 10 2024 |
Exports:%>%mutalisk_best_signature_directory_to_dataframemutalisk_dataframe_add_metadatamutalisk_dataframe_inform_user_of_metadatamutalisk_dataframe_metadata_column_namesmutalisk_to_dataframepallette_cols23_customisedplot_signature_contribution_jitterplotplot_stacked_bar
Dependencies:assertionsbackportscheckmateclicolorspacecpp11data.tabledichromatdplyrfansifarverforcatsgenericsggplot2ggthemesgluegtablegtoolsisobandlabelinglatticelifecyclemagrittrmapprojmapsMASSMatrixmgcvmunsellnlmepalspillarpkgconfigpurrrR6RColorBrewerrlangscalesstringistringrtibbletidyrtidyselectutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Sample Names From Mutalisk Output | extract_sample_names_from_mutalisk_filenames |
| Sample Names From Mutalisk File Contents | extract_sample_names_from_mutalisk_files |
| Mutalisk directory to dataframe | mutalisk_best_signature_directory_to_dataframe |
| Add sample metadata | mutalisk_dataframe_add_metadata |
| Expand mutalisk_dataframe | mutalisk_dataframe_expand |
| Mutalisk Dataframe | mutalisk_dataframe_inform_user_of_metadata |
| Mutalisk Dataframe | mutalisk_dataframe_metadata_column_names |
| Mutalisk files to dataframe | mutalisk_to_dataframe |
| Mutalisk to dataframe | mutalisk_to_dataframe_single_sample |
| Custom Palette | pallette_cols23_customised |
| Plot Signature-Level Dotplot Plots a signature-Level dotplot | plot_signature_contribution_jitterplot |
| Cohort-Level Mutational Signature Visualisation | plot_stacked_bar |
